Ing. Robert Cimrman, Ph.D.

Místnost: TC 233
Telefon: +420 377 634 711
Oddělení: Oddělení mechaniky mikrostruktur
Pozice: Vědecký pracovník
E-mail:

Životopis

Vzdělání

  • 1993 – 1998 – Ing., ZČU v Plzni, Fakulta aplikovaných věd, obor Paralelní procesy a numerické metody
  • 1998 – 2002 – Ph.D., ZČU v Plzni, Fakulta aplikovaných věd, obor Aplikovaná mechanika

Pracovní zkušenosti

  • 2001 – 2010 – ZČU v Plzni, Fakulta aplikovaných věd, Katedra mechaniky (vědecký pracovník)
  • 2001 – dosud – ZČU v Plzni, Výzkumné centrum Nové technologie (vědecký pracovník)
  • 2017 – dosud – Ústav termomechaniky AV ČR, v.v.i., oddělení Rázy a vlny v tělesech (vědecký pracovník)
  • 2017 – dosud – ZČU v Plzni, Fakulta aplikovaných věd, výzkumné centrum NTIS – Nové technologie pro informační společnost (vědecký pracovník)

Zahraniční odborné a studijní stáže

  • 2002 – 2003 – post-doc v INRIA Rocquencourt, Francie (1 rok)
  • 2010 – 2011 – stipendium SCIEX-NMS na Université de Fribourg, Švýcarsko (6 měsíců)

Výuka

Publikace

Seznam významných publikací

  • NOVÁK, M., CIMRMAN, R., LUKEŠ, V., ROHAN, E., VACKÁŘ, J. Mixing algorithms for fixed-point iterations in self-consistent electronic structure calculations. In PROCEEDINGS OF ENGINEERING MECHANICS 2018. Prague: Institute of Theoretical and Applied Mechanics of the Czech Academy of Sciences, 2018. s. 613-616. ISBN: 978-80-86246-88-8 , ISSN: 1805-8248
  • ROHAN, E., CIMRMAN, R. Modelling of evanescent and propagating modes in homogenized phononic structures in frequency and time domains. In COMPDYN 2017 - Proceedings of the 6th International Conference on Computational Methods in Structural Dynamics and Earthquake Engineering. Athens: National Technical University of Athens, 2017. s. 1330-1346. ISBN: 978-618-82844-1-8
  • TONAR, Z., KOCHOVÁ, P., CIMRMAN, R., PERKTOLD, J., KUBÍKOVÁ, T., DEMJEN, E., LIŠKA, V., KRÁLÍČKOVÁ, M., WITTER, K. Links between the Orientation of Vascular Smooth Muscle and Microscopical Composition of Aortic Segments. In Solid State Phenomena. Switzerland: Trans Tech Publications, 2017. s. 329-332. ISBN: 978-3-03835-626-4 , ISSN: 1662-9779
  • ROHAN, E., CIMRMAN, R., MIARA, B. Modelling response of phononic Reissner-Mindlin plates using a spectral decomposition. Applied mathematics and computation, 2015, roč. 258, č. August 2015, s. 617-630. ISSN: 0096-3003
  • KOCHOVÁ, P., CIMRMAN, R., ŠTENGL, M., OŠŤÁDAL, B., TONAR, Z. A mathematical model of the carp heart ventricle during the cardiac cycle. JOURNAL OF THEORETICAL BIOLOGY, 2015, roč. 373, č. May, s. 12-25. ISSN: 0022-5193
  • TONAR, Z., KOCHOVÁ, P., CIMRMAN, R., PERKTOLD, J., WITTER, K. Segmental differences in the orientation of smooth muscle cells in the tunica media of porcine aortae. Biomechanics and Modeling in Mechanobiology, 2015, roč. 14, č. 2, s. 315-332. ISSN: 1617-7959
  • ROHAN, E., MIARA, B., CIMRMAN, R. Wave propagation in phononic plates -- spectral decomposition, polarization and band gaps. In Proceedings of the Twelfth International Conference on Computational Structures Technology. Stirlingshire: Civil Comp Press, 2014. s. 1-21. ISBN: 978-1-905088-61-4 , ISSN: 1759-3433
  • KOCHOVÁ, P., WITTER, K., CIMRMAN, R., MEZEROVÁ, J., TONAR, Z. A preliminary study into the correlation of stiffness of the laminar junction of the equine hoof with the length density of its secondary lamellae. Equine Veterinary Journal, 2013, roč. 45, č. 2, s. 170-175. ISSN: 0425-1644
  • TURJANICOVÁ, J., ROHAN, E., CIMRMAN, R., NAILI, S. MODELLING OF CORTICAL BONE TISSUE AS A FLUID SATURATED DOUBLE-POROUS MATERIAL - PARAMETRIC STUDY. Sborník vědeckých prací Vysoké školy báňské-Technické univerzity Ostrava., 2013, roč. 59, č. 1, s. 131-136. ISSN: 1210-0471
  • ROHAN, E., LUKEŠ, V., CIMRMAN, R. Modeling flows in periodically heterogenous porous media with deformation-dependent permeability. In Computational Plasticity XII - Fundamentals and Applications. Barcelona: CIMNE, 2013. s. 1436-1447. ISBN: 978-84-941531-5-0
  • ROHAN, E., CIMRMAN, R. Multiscale FE simulation of diffusion-deformation processes in homogenized dual-porous media. Mathematics and Computers in Simulation, 2012, roč. 82, č. 10, s. 1744-1772. ISSN: 0378-4754
  • ROHAN, E., CIMRMAN, R., NAILI, S. Modelling Cortical Bone Properties Using Homogenisation of Double Porous Medium. In Proceedings of the 3rd GAMM Seminar on Continuum Biomechanics. Stuttgart: Universitat Stuttgart, 2012. s. 53-74. ISBN: 978-3-937399-21-8
  • CIMRMAN, R., VACKÁŘ, J., NOVÁK, M., ČERTÍK, O., ROHAN, E., TŮMA, M. FINITE ELEMENT CODE IN PYTHON AS A UNIVERSAL AND MODULAR TOOL APPLIED TO KOHN-SHAM EQUATIONS. In ECCOMAS 2012 : Congress CD-ROM Proceedings. Vídeň: Vienna University of Technology, 2012. s. 5212-5221. ISBN: 978-3-9502481-9-7
  • CIMRMAN, R., ROHAN, E. Phono-WD-RMP - Software for modeling wave dispersion in periodically heterogeneous Reissner-Mindlin plates. 2012.
  • TONAR, Z., KOCHOVÁ, P., CIMRMAN, R., WITTER, K., JANÁČEK, J., ROHAN, V. Microstructure oriented modelling of hierarchically perfused porous media for cerebral blood flow evaluation. Key Engineering Materials, 2011, roč. Neuveden, č. 465, s. 286-289. ISSN: 1013-9826
  • KOCHOVÁ, P., TONAR, Z., WITTER, K., CIMRMAN, R., MEZEROVÁ, J. Microcracks and mechanical behaviour of corio-epidermal junction of equine hoof. Key Engineering Materials, 2011, roč. 2011, č. 465, s. 342-345. ISSN: 1013-9826
  • KOCHOVÁ, P., CIMRMAN, R., JANÁČEK, J., WITTER, K., TONAR, Z. How to asses, visualize and compare the anisotropy of linear structures reconstructed from optical sections ? A study based on histopathological quantification of human brain microvessels. JOURNAL OF THEORETICAL BIOLOGY, 2011, roč. 286, č. Neuvedeno, s. 67-78. ISSN: 0022-5193
  • CIMRMAN, R., ROHAN, E. On identification of the arterial model parameters from experiments applicable "in vivo". Mathematics and Computers in Simulation, 2010, roč. 80, č. 6, s. 1232-1245. ISSN: 0378-4754
  • ROHAN, E., CIMRMAN, R. Two-scale modeling of tissue perfusion problem using homogenization of dual porous media. International Journal for Multiscale Computational Engineering, 2010, roč. 8, č. 1, s. 81-102. ISSN: 1543-1649
  • KOCHOVÁ, P., CIMRMAN, R., TONAR, Z., MEZEROVÁ, J. Comparison between mechanical properties of fresh and frozen specimens of corio-epidermal junction of equine hoof. In Proceedings : 48th international scientific conference : Experimental stress analysis 2010. Olomouc: Palacky University, 2010. s. 155-160. ISBN: 978-80-244-2533-7
  • KOCHOVÁ, P., CIMRMAN, R. elfpy : Experimental lab fits in Python. 2010.
  • KOCHOVÁ, P., CIMRMAN, R. esofspy: Evaluation of spatial orientation of fiber systems in Python. 2010.
  • ROHAN, E., CIMRMAN, R. On acoustic band gaps in homogenized piezoelectric phononic materials. Applied and Computational Mechanics, 2010, roč. 4, č. 1, s. 89-100. ISSN: 1802-680X
  • KOCHOVÁ, P., CIMRMAN, R., ROHAN, E. Orientation of smooth muscle cells with application in mechanical model of gastropod tissue. Applied and Computational Mechanics, 2009, roč. 3, č. 1, s. 75-86. ISSN: 1802-680X
  • ROHAN, E., CIMRMAN, R. Dispersion properties in homogenized piezoelectric phononic materials. In Engineering Mechanics 2009. Prague: Institute of Theoretical and Applied Mechanics AS CR, 2009. s. 1091-1102. ISBN: 978-80-86246-35-2
  • ROHAN, E., CIMRMAN, R., OČENÁŠEK, J. On modeling process of expression of the fluid saturated medium in screw compression machine. In Engineering Mechanics 2009. Prague: Institute of Theoretical and Applied Mechanics, Academy of Sciences of the Czech Republic, 2009. s. 1103-1111. ISBN: 978-80-86246-35-2
  • CIMRMAN, R., ROHAN, E. Three-phase phononic material. Applied and Computational Mechanics, 2009, roč. 3, č. 1, s. 5-16. ISSN: 1802-680X
  • ROHAN, E., CIMRMAN, R., NAILI, S., LEMAIRE, T. Multiscale modelling of compact bone based on homogenization of double porous medium. In Computational Plasticity X. Barcelona: CIMNE, 2009. s. 1-4. ISBN: 978-84-96736-69-6
  • ČECHOVÁ, H., CIMRMAN, R. Implementation of skeletal muscle model with advanced activation control. Applied and Computational Mechanics, 2009, roč. 3, č. 2, s. 305-318. ISSN: 1802-680X
  • CIMRMAN, R., ROHAN, E. Software for simulation of perfusion in contracting fish heart. 2009.
  • CIMRMAN, R., ROHAN, E. Software for simulation of compact bone with fading memory effects. 2009.
  • CIMRMAN, R., TONAR, Z., KOCHOVÁ, P. Gensei: software for generating serial sections through objects with known statistical properties and simulating stereological quantification in 3D. 2009.
  • TONAR, Z., CIMRMAN, R., KOCHOVÁ, P. Generating images of serial sections of model histological structures with known statistical properties. Plzeňský lékařský sborník, 2009, roč. 2009, č. Suppl. 82, s. 57-61. ISSN: 0139-603X
  • ROHAN, E., CIMRMAN, R., LUKEŠ, V. Computational homogenization of perfused deforming tissues. In Proceedings of the Sixth International Conference on Engineering Computational Technology. Stirlingshire: Civil-Comp Press, 2008. s. 1-19. ISBN: 978-1-905088-26-3
  • HYNČÍK, L., KOCKOVÁ, H., ČÍHALOVÁ, L., CIMRMAN, R. Optimization of tram face with respect to passive safety. Applied and Computational Mechanics, 2008, roč. 2, č. 1, s. 53-62. ISSN: 1802-680X
  • ROHAN, E., CIMRMAN, R., LUKEŠ, V., ROHAN, V. Conception of the multicompartment model for cerebral perfusion estimation, Homogenization of hierarchical branching structures. In Modelling of Heterogeneous Materials with Applications in Construction and Biomedical Engineering. Prague: Czech Technical University, 2007. s. 45-47. ISBN: 978-80-01-03762-1
  • KOCHOVÁ, P., CIMRMAN, R., ROHAN, E. Parameter identification and mechanical modelling of smooth muscle and connective tissue. In Applied Mechanics 2007. Ostrava: VŠB - Technical University, 2007. s. 1-12. ISBN: 978-80-248-1389-9
  • ROHAN, E., CIMRMAN, R., LUKEŠ, V. On Multiscale Modelling of Perfused Tissues Using Homogenization of Strongly Heterogeneous Biot Continuum. In Proceedings of the 2nd GAMM Seminar on Continuum Biomechanics. Stuttgart: Universität Stuttgart, 2007. s. 77-86.
  • DEMJANČUKOVÁ, L., TONAR, Z., BOIRON, O., POLANSKÝ, J., ROHAN, E., CIMRMAN, R. Composite model of healthy arterial wall: material identification based on uniaxial tensile tests and morphometric analysis. Journal of Biomechanics, 2006, roč. 39, č. suppl.1, s. 622-622. ISSN: 0021-9290
  • ROHAN, E., CIMRMAN, R., LUKEŠ, V. Numerical modelling and homogenized constitutive law of large deforming fluid saturated heterogeneous solids. Computers and Structures, 2006, roč. 84, s. 1095-1114. ISSN: 0045-7949
  • CIMRMAN, R., KROC, J., ROHAN, E., ROSENBERG, J., TONAR, Z. On coupling cellular automata based activation and finite element muscle model applied to heart ventricle modelling. In Simulations in Biomedicine V. Southampton : WIT Press , 2003. s. 29-34. ISBN: 1853129658
  • TONAR, Z., KROC, J., HYNČÍK, L., CIMRMAN, R., OČENÁŠEK, J., ZEMČÍK, R. Creation of the heart-ventricles morphological model and simulation of its excitation. Plzeňský lékařský sborník, 2003, roč. 0, č. Suppl. 78/2003, s. 123-126. ISSN: 0139-603X
  • ROHAN, E., CIMRMAN, R., TONAR, Z., KROC, J. Towards 3D modelling of cardiac muscle mechanics. In Biomechanical modeling & numerical simulation. Prague: Institute of Thermomechanics, Academy of Sciences of the Czech Republic, 2002. s. 49-56. ISBN: 80-85918-79-X

Ostatní publikace

  • NOVÁK, M., VACKÁŘ, J., CIMRMAN, R. Sensitivity analysis of total energy in electronic structure calculations. In Computational Mechanics 2018. Plzueň: University of West Bohemia, Univerzitní 8, 301 00 Plze¬, Czech Republic, IC 49777513, 2018. s. 75-76. ISBN: 978-80-261-0819-1 , ISSN: neuvedeno
  • ROHAN, E., NGUYEN, V., LUKEŠ, V., CIMRMAN, R., NAILI, S. On approaches, methods and problems related to wave dispersion in porous media. In Computational mechanics - BOOK OF EXTENDED ABSTRACTS. Plzeň, Czech Republic: University of West Bohemia, 2018. s. 91-92. ISBN: 978-80-261-0819-1
  • ROHAN, E., LUKEŠ, V., TURJANICOVÁ, J., CIMRMAN, R. Two level homogenization of flows in deforming double porosity media: Biot-Darcy-Brinkman model. In Proceedings of the XIV International Conference on Computational Plasticity - Fundamentals and Applications. Barcelona: International Center for Numerical Methods in Engineering (CIMNE), 2017. s. 184-195. ISBN: 978-84-946909-6-9
  • ROHAN, E., LUKEŠ, V., CIMRMAN, R. Homogenization of the fluid-saturated piezoelectric porous metamaterials. In Proceedings of the VII International Conference on Coupled Problems in Science and Engineering. Barcelona: International Center for Numerical Methods in Engineering (CIMNE), 2017. s. 1080-1091. ISBN: 978-84-946909-2-1
  • CIMRMAN, R., LUKEŠ, V., ROHAN, E. Hierarchical numerical modelling of porous media in SfePy. In Computational Mechanics 2016 - EXTENDED ABSTRACTS. Pilsen: University of West Bohemia, 2016. s. 9-10. ISBN: 978-80-261-0647-0
  • LUKEŠ, V., JIŘÍK, M., JONÁŠOVÁ, A., ROHAN, E., BUBLÍK, O., CIMRMAN, R. Numerical simulation of liver perfusion: from CT scans to FE model. In Proceedings of the 7th European Conference on Python in Science (EuroSciPy 2014). 2014. s. 79-84.
  • TURJANICOVÁ, J., ROHAN, E., NAILI, S., CIMRMAN, R. Parametric study of cortical bone tissue modelled as a fluid saturated double-porous material. In Applied Mechanics 2013 : proceedings of extended abstracts. Ostrava: VŠB - Technical University, 2013. s. 1-2. ISBN: 978-80-248-2978-4
  • TURJANICOVÁ, J., ROHAN, E., CIMRMAN, R., NAILI, S. Cortical bone tissue modelled as double-porous medium: Parameter study. In SVK FAV 2013 -magisterské a doktorské studijní programy, sborník rozšířených abstraktů. Plzeň: Západočeská univerzita v Plzni, 2013. s. 29-30. ISBN: 978-80-261-0238-0 , ISSN: neuvedeno
  • ROHAN, E., LUKEŠ, V., CIMRMAN, R. Modeling of heterogeneous large deforming perfused media using homogenization-based preconditioning. In ESCO 2012. Plzeň: Západočeská univerzita v Plzni, 2012. s. 1.
  • CIMRMAN, R., ROHAN, E. Hierarchical numerical modelling of porous media. In 27th conference with international participation Computational Mechanics 2011. Plzeň: Západočeská univerzita, 2011. s. 1-2. ISBN: 978-80-261-0027-0
  • ROHAN, E., CIMRMAN, R., LUKEŠ, V. Homogenization of Biot-type Multi-compartement Medium with Double Porosity for Multiscale Modeling of Diffusion-deformation Processes. In SIAM Conference on Mathematics and Computational Issues in the Geosciences, Book of Abstracts.. Long Beach: 2011. s. 133-133.
  • ROHAN, E., CIMRMAN, R. Modeling flow porous medium with coulomb friction on walls of ducts. Prague, 2010., ISBN: 978-80-87012-26-0,
  • ROHAN, E., CIMRMAN, R. On Modeling Flow of a Large Deforming Porous Medium with Rate-Dependent Coulomb Friction Conditions. Valencia, 2010.
  • CIMRMAN, R., ROHAN, E. Treatment of friction-driven flow of porous medium. Pilsen, 2010., ISBN: 978-80-7043-919-7,
  • ROHAN, E., CIMRMAN, R., GRISO, G., LEMAIRE, T., NAILI, S. Homogenization of a fluid saturated medium with dual porosity and semipermeable discontinuity interfaces. Paříž, 2010.
  • ROHAN, E., LUKEŠ, V., CIMRMAN, R. Multiscale modeling of tissue perfusion based on homogenization. In Human Biomechanics 2010. Liberec: Technical university, 2010. ISBN: 978-80-7372-648-5
  • ROHAN, E., CIMRMAN, R., NAILI, S. Modelling cortical bone properties using homogenization. In 3rd GAMM Seminar on Continuum Biomechanics. Dresden: GAMM, 2010. s. 7.
  • TONAR, Z., CIMRMAN, R., KOCHOVÁ, P. Generating images of serial sections of model histological structures with known statistical properties. In Morphology 2009. Prague: Charles University, 2009. s. 156. ISBN: 978-80-254-3882-4
  • ROHAN, E., CIMRMAN, R. On acoustic band gaps in homogenized piezoelectric phononic materials. In Computational Mechanics 2009. Pilsen: University of West Bohemia, 2009. s. 1-2. ISBN: 978-80-7043-824-4
  • CIMRMAN, R., ROHAN, E. On modeling the fluid saturated medium in screw compression machine: pilot study. In Computational Mechanics 2009. Pilsen: University of West Bohemia, 2009. s. 1-2. ISBN: 978-80-7043-824-4
  • KOCHOVÁ, P., CIMRMAN, R., TONAR, Z. Automatic evaluation of mechanical measurements using Python with application to equine hoof and carp intestine. In Computational Mechanics 2009. Pilsen: University of West Bohemia, 2009. ISBN: 978-80-7043-824-4
  • KOCHOVÁ, P., CIMRMAN, R., ROHAN, E. Orientation of smooth muscle cells with application in mechanical model of gastropod tissue. In Computational Mechanics 2008. Pilsen: University of West Bohemia, 2008. s. 1-2. ISBN: 978-80-7043-712-4
  • HYNČÍK, L., KOCKOVÁ, H., ČÍHALOVÁ, L., CIMRMAN, R. Optimization of tram face with respect to passive safety . In Computational Mechanics 2008. Pilsen: University of West Bohemia, 2008. s. 1-2. ISBN: 978-80-7043-712-4
  • HYNČÍK, L., KOCKOVÁ, H., ČÍHALOVÁ, L., CIMRMAN, R. Optimalizace pasivních bezpečnostních prvků tramvaje s ohledem na chodce, řidiče a pasažéra. In Aplikace konstrukční mechaniky a biomechaniky pro zvyšování pasivní bezpečnosti a komfortu cestujících. V Plzni: Západočeská univerzita, 2008. s. 1-8. ISBN: 978-80-7043-668-4
  • ROHAN, E., LUKEŠ, V., CIMRMAN, R. Homogenization in soft biological tissue modelling - two-scale FE computing. In 2nd GAMM seminar on Continuun biomechanics. Gesselschaft für Angewandte Mathematik und Mechanik , 2006. s. 19-19.
  • DEMJANČUKOVÁ, L., CIMRMAN, R., ROHAN, E. Identification of material parameters in modelling of healthy arterial wall. In Human biomechanics 2006. Brno: University of Technology, 2006. s. 78-79. ISBN: 80-214-3232-2
  • TONAR, Z., ROHAN, E., JENÍK, J., CIMRMAN, R. Geometry and composite model of arterial wall. In Morphology 2003. Hradec Králové: Czech Anatomical Society, 2003. s. 72-72. ISBN: 80-239-1412-X
  • TONAR, Z., KROC, J., ROHAN, E., CIMRMAN, R., OČENÁŠEK, J., ZEMČÍK, R. Finite element model of heart morphology and simulation of its excitation. In Verhandlungen der Anatomischen Gesellschaft. München: Urban & Fischer, 2003. s. 180-180. ISBN: 3-437-31206-5

Ostatní

  • Software: https://sfepy.org

Patička